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http://hdl.handle.net/2445/183016
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DC Field | Value | Language |
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dc.contributor.author | Martin Malpartida, Pau | - |
dc.contributor.author | Hausvik, Emil | - |
dc.contributor.author | Underhaug, Jarl | - |
dc.contributor.author | Torner, Carles | - |
dc.contributor.author | Martinez, Aurora | - |
dc.contributor.author | Macias, Maria Jesus | - |
dc.date.accessioned | 2022-02-08T17:44:05Z | - |
dc.date.available | 2022-11-19T06:10:26Z | - |
dc.date.issued | 2021-11-19 | - |
dc.identifier.issn | 0022-2836 | - |
dc.identifier.uri | http://hdl.handle.net/2445/183016 | - |
dc.description.abstract | The identification of new drugs for novel therapeutic targets requires the screening of libraries containing tens of thousands of compounds. While experimental screenings are assisted by high-throughput technologies, in target-based biophysical assays, such as differential scanning fluorimetry (DSF), the analysis steps must be calculated manually, often combining several software packages. To simplify the determination of the melting temperature (Tm) of the target and the change induced by ligand binding (?Tm), we developed the HTSDSF explorer, a versatile, all-in-one, user-friendly application suite. Implemented as a server-client application, in the primary screenings, HTSDSF explorer pre-analyzes and displays the Tm and ?Tm results interactively, thereby allowing the user to study hundreds of conditions and select the primary hits in minutes. This application also allows the determination of preliminary binding constants (KD) through a series of subsequent dose–response assays on the primary hits, thereby facilitating the ranking of validated hits and the advance of drug discovery efforts. © 2021 Elsevier Ltd | ca |
dc.format.extent | 10 p. | - |
dc.format.mimetype | application/pdf | - |
dc.language.iso | eng | ca |
dc.publisher | Academic Press | ca |
dc.relation.isformatof | Versió postprint del document publicat a: https://doi.org/10.1016/j.jmb.2021.167372 | - |
dc.relation.ispartof | Journal Of Molecular Biology, 2021 | - |
dc.relation.uri | https://doi.org/10.1016/j.jmb.2021.167372 | - |
dc.rights | cc by-nc-nd (c) Elsevier, 2021 | - |
dc.rights.uri | http://creativecommons.org/licenses/by-nc-nd/3.0/es/ | * |
dc.source | Articles publicats en revistes (Institut de Recerca Biomèdica (IRB Barcelona)) | - |
dc.subject | automatic Tm automatic KD analysis | ca |
dc.subject | Differential scanning fluorimetry high-throughput compound screening thermal shift assay | ca |
dc.subject.classification | Arquitectura client-servidor (Informàtica) | - |
dc.subject.classification | Medicaments | - |
dc.subject.other | Client/server computing | - |
dc.subject.other | Drugs | - |
dc.title | HTSDSF Explorer, A Novel Tool to Analyze High-throughput DSF Screenings: HTSDSF Explorer, a tool for DSF screenings | ca |
dc.type | info:eu-repo/semantics/article | ca |
dc.type | info:eu-repo/semantics/acceptedVersion | - |
dc.date.updated | 2022-02-08T13:49:54Z | - |
dc.rights.accessRights | info:eu-repo/semantics/openAccess | - |
dc.identifier.idimarina | 6543073 | - |
Appears in Collections: | Articles publicats en revistes (Institut de Recerca Biomèdica (IRB Barcelona)) |
Files in This Item:
File | Description | Size | Format | |
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Martin et al_J Mol Biol_2021.pdf | 1.34 MB | Adobe PDF | View/Open |
This item is licensed under a Creative Commons License