Browsing by Author Orozco López, Modesto

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Issue DateTitleAuthor(s)
17-Feb-2023Omicron Mutations Increase Interdomain Interactions and Reduce Epitope Exposure in the SARS-CoV-2 SpikeWieczór, Milosz; Tang, Phu K.; Orozco López, Modesto; Cossio, Pilar
26-Apr-2019Oncogenic mutations at the EGFR ectodomain structurally converge to remove a steric hindrance on a kinase-coupled cryptic epitopeOrellana, Laura; Thorne, Aamy; Lema, Rafael; Gustavsson, Johan; Parisian, Alison D.; Hospital, Adam; Cordeiro, Tiago N.; Bernadó Peretó, Pau; Scott, Andrew M.; Brun Heath, Isabelle; Lindahl, Erik; Cavenee, Webster K.; Furnari, Frank B.; Orozco López, Modesto
Jan-2016Parmbsc1: A refined force-field for DNA simulationsIvani, Ivan; Dans, Pablo D.; Noy Freixa, Agnès; Pérez, Alberto; Faustino Pló, Ignacio; Hospital Gasch, Adam; Walther, Jürgen; Andrio, Pau; Goñi Macià, Josep Ramon; Balaceanu, Alexandra; Portella, Guillem; Battistini, Federica; Gelpí Buchaca, Josep Lluís; González, Carlos; Vendruscolo, Michele; Laughton, Charles A.; Harris, Sarah A.; Case, David A.; Orozco López, Modesto
13-Dec-2016Parmbsc1: Parameterization and Validation of a new State-of-the-art Force Field for DNA SimulationsIvani, Ivan
29-Sep-2022Parmbsc2: Development of an accurate force field for nucleic acids simulationsGallego Pérez, Diego
27-Sep-2018Plasticity in oligomerization, operator architecture, and DNA binding in the mode of action of a bacterial B12-based photoreceptor.Fernández-Zapata, Jesús; Pérez-Castaño, Ricardo; Aranda, Juan; Colizzi, Francesco; Polanco, María Carmen; Orozco López, Modesto; Padmanabhan, Shalini; Elías-Arnanz, Montserrat
27-Apr-2017PMut. A web-based tool for the annotation of pathological variants on proteins, 2017 updateLópez Ferrando, Víctor; Gazzo, Andrea; Cruz, Xavier de la; Orozco López, Modesto; Gelpí Buchaca, Josep Lluís
25-Jan-2019Predicting the Limit of Intramolecular Hydrogen Bonding with Classical Molecular DynamicsColizzi, Francesco; Hospital Gasch, Adam; Zivanovic, Sanja; Orozco López, Modesto
31-Aug-2016Prediction and validation of protein intermediate states from structurally rich ensembles and coarse grained simulationsOrellana, Laura; Yoluk, Ozge; Carrillo, Oliver; Orozco López, Modesto; Lindhal, Erik
21-Sep-2017Prevalent sequences in the Human Genome Can Form Mini i-Motif Structures at Physiological pHMir Morro, Bartomeu; Serrano, Israel; Buitrago Ospina, Diana Camila; Orozco López, Modesto; Escaja Sánchez, Nuria; González, Carlos
15-Dec-2008Les propietats físiques de l'ADN en escala genòmicaGoñi Macià, Josep Ramon
30-May-2014Protein dynamics studied by coarse-grained and atomistic theoretical approachesOrellana, Laura
22-Nov-2016Quantification of pathway crosstalk reveals novel synergistic drug combinations for breast cancerJaeger, Samira; Igea, Ana; Arroyo Sánchez, Rodrigo; Alcalde, Victor; Canovas, Begoña; Orozco López, Modesto; Nebreda, Àngel R.; Aloy, Patrick, 1972-
10-Dec-2015Residues coevolution guides the systematic identification of alternative functional conformations in proteinsSfriso, Pedro; Duran Frigola, Miquel; Mosca, Roberto; Emperador, Agustí; Aloy, Patrick, 1972-; Orozco López, Modesto
4-Oct-2019Revealing DNA dynamics from atomistic to genomic level by multiscale computational approachesWalther, Jürgen
13-Dec-2016Small Details Matter: The 2'-Hydroxyl as a Conformational Switch in RNADarré, Leonardo; Ivani, Ivan; Dans, Pablo D.; Gómez, Hansel; Hospital Gasch, Adam; Orozco López, Modesto
24-Jul-2017Structural basis of a histidine-DNA nicking/joining mechanism for gene transfer and promiscuous spread of antibiotic resistancePluta, Radoslaw; Boer, Roeland; Lorenzo Díaz, Fabián; Russi, Silvia; Gómez, Hansel; Fernández López, Cris; Pérez Luque, Rosa; Orozco López, Modesto; Espinosa, Manuel; Coll, Miquel
1-Jan-2023Structural basis of a redox-dependent conformational switch that regulates the stress kinase p38αPous, Joan; Bagiński, Błażej Mikołaj; Martín Malpartida, Pau; González, Lorena; Scarpa, Margherita; Aragón Altarriba, Eric; Ruiz, Lidia; Mees, Rebeca A.; Iglesias Fernández, Javier; Orozco López, Modesto; Nebreda, Àngel R.; Macias, Maria Jesus
27-Feb-2015Synthesis and Properties of 2′-Deoxy-2′,4′-difluoroarabinose-Modified Nucleic AcidsMartínez-Montero, Saúl; Deleavey, Glen F.; Dierker-Viil, Arden; Lindovska, Petra; Ilina, Tatiana; Portella, Guillem; Orozco López, Modesto; Parniak, Michael A.; Damha, Masad J.
23-May-2018Targeting RNA structure in SMN2 reverses spinal muscular atrophy molecular phenotypesGarcía López, Amparo; Tessaro, Francesca; Jonker, Hendrik R. A.; Wacker, Anna; Richter, Christian; Comte, Arnaud; Berntenis, Nikolaos; Schmucki, Roland; Hatje, Klas; Petermann, Olivier; Chiriano, Gianpaolo; Perozzo, Remo; Sciarra, Daniel; Konieczny, Piotr; Faustino Pló, Ignacio; Fournet, Guy; Orozco López, Modesto; Artero, Ruben; Metzger, Friedrich; Ebeling, Martin; Goekjian, Peter; Joseph, Benoît; Schwalbe, Harald; Scapozza, Leonardo