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http://hdl.handle.net/2445/174496
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DC Field | Value | Language |
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dc.contributor.author | Feng, Shaohong | - |
dc.contributor.author | Stiller, Josefin | - |
dc.contributor.author | Deng, Yuan | - |
dc.contributor.author | Armstrong, Joel | - |
dc.contributor.author | Fang, Qi | - |
dc.contributor.author | Reeve, Andrew Hart | - |
dc.contributor.author | Xie, Duo | - |
dc.contributor.author | Chen, Guangji | - |
dc.contributor.author | Guo, Chunxue | - |
dc.contributor.author | Faircloth, Brant C. | - |
dc.contributor.author | Petersen, Bent | - |
dc.contributor.author | Gemmell, Neil J. | - |
dc.contributor.author | Dussex, Nicolas | - |
dc.contributor.author | Mouritsen, Henrik | - |
dc.contributor.author | Thiele, Nadine | - |
dc.contributor.author | Delmore, Kira | - |
dc.contributor.author | Liedvogel, Miriam | - |
dc.contributor.author | Franke, Andre | - |
dc.contributor.author | Hoeppner, Marc P. | - |
dc.contributor.author | Fidler, Ellen | - |
dc.contributor.author | Krone, Oliver | - |
dc.contributor.author | Milá, Borja | - |
dc.contributor.author | Fudickar, Adam M. | - |
dc.contributor.author | Wang, Zongji | - |
dc.contributor.author | Zhou, Qi | - |
dc.contributor.author | Diekhans, Mark | - |
dc.contributor.author | Chen, Wanjun | - |
dc.contributor.author | Andreu Sanchez, Sergio | - |
dc.contributor.author | Margaryan, Ashot | - |
dc.contributor.author | Howard, Jason Travis | - |
dc.contributor.author | Parent, Carole | - |
dc.contributor.author | Pacheco, George | - |
dc.contributor.author | Sinding, Mikkel-Holger S. | - |
dc.contributor.author | Puetz, Lara | - |
dc.contributor.author | Cavill, Emily | - |
dc.contributor.author | Ribeiro, Angela M. | - |
dc.contributor.author | Eckhart, Leopold | - |
dc.contributor.author | Fjeldsa, Jon | - |
dc.contributor.author | Hosner, Peter A. | - |
dc.contributor.author | Brumfield, Robb T. | - |
dc.contributor.author | Christidis, Les | - |
dc.contributor.author | Bertelsen, Mads F. | - |
dc.contributor.author | Sicheritz Ponten, Thomas | - |
dc.contributor.author | Tietze, Dieter Thomas | - |
dc.contributor.author | Robertson, Bruce C. | - |
dc.contributor.author | Song, Gang | - |
dc.contributor.author | Borgia, Gerald | - |
dc.contributor.author | Claramunt, Santiago | - |
dc.contributor.author | Lovette, Irby J. | - |
dc.contributor.author | Cowen, Saul J. | - |
dc.contributor.author | Njoroge, Peter | - |
dc.contributor.author | Dumbacher, John Philip | - |
dc.contributor.author | Ryder, Oliver A. | - |
dc.contributor.author | Fuchs, Jérôme | - |
dc.contributor.author | Bunce, Michael | - |
dc.contributor.author | Burt, David W. | - |
dc.contributor.author | Cracraft, Joel | - |
dc.contributor.author | Meng, Guanliang | - |
dc.contributor.author | Hackett, Shannon J. | - |
dc.contributor.author | Ryan, Peter G. | - |
dc.contributor.author | Jønsson, Knud Andreas | - |
dc.contributor.author | Jamieson, Ian G. | - |
dc.contributor.author | da Fonseca, Rute R. | - |
dc.contributor.author | Braun, Edward L. | - |
dc.contributor.author | Houde, Peter | - |
dc.contributor.author | Mirarab, Siavash | - |
dc.contributor.author | Suh, Alexander | - |
dc.contributor.author | Hansson, Bengt | - |
dc.contributor.author | Ponnikas, Suvi | - |
dc.contributor.author | Sigeman, Hanna | - |
dc.contributor.author | Stervander, Martin | - |
dc.contributor.author | Frandsen, Paul B. | - |
dc.contributor.author | van der Zwan, Henriette | - |
dc.contributor.author | van der Sluis, Rencia | - |
dc.contributor.author | Visser, Carina | - |
dc.contributor.author | Balakrishnan, Christopher N. | - |
dc.contributor.author | Clark, Andrew G. | - |
dc.contributor.author | Fitzpatrick, John W. | - |
dc.contributor.author | Bowman, Reed | - |
dc.contributor.author | Chen, Nancy | - |
dc.contributor.author | Cloutier, Alison | - |
dc.contributor.author | Sackton, Timothy B. | - |
dc.contributor.author | Edwards, Scott V. | - |
dc.contributor.author | Foote, Dustin J. | - |
dc.contributor.author | Shakya, Subir B. | - |
dc.contributor.author | Sheldon, Frederick H. | - |
dc.contributor.author | Vignal, Alain | - |
dc.contributor.author | Soares, André E. R. | - |
dc.contributor.author | Shaphiro, Beth | - |
dc.contributor.author | González-Solís, Jacob | - |
dc.contributor.author | Ferrer-Obiol, Joan | - |
dc.contributor.author | Rozas Liras, Julio A. | - |
dc.contributor.author | Riutort León, Marta | - |
dc.contributor.author | Tigano, Anna | - |
dc.contributor.author | Friesen, Vicki | - |
dc.contributor.author | Dalén, Love | - |
dc.contributor.author | Urrutia, Araxi O. | - |
dc.contributor.author | Székely, Tamás | - |
dc.contributor.author | Liu, Yang | - |
dc.contributor.author | Campana, Michael G. | - |
dc.contributor.author | Corvelo, André | - |
dc.contributor.author | Fleischer, Robert C. | - |
dc.contributor.author | Rutherford, Kim M. | - |
dc.date.accessioned | 2021-03-01T13:56:07Z | - |
dc.date.available | 2021-03-01T13:56:07Z | - |
dc.date.issued | 2020-11-11 | - |
dc.identifier.issn | 0028-0836 | - |
dc.identifier.uri | http://hdl.handle.net/2445/174496 | - |
dc.description.abstract | Whole-genome sequencing projects are increasingly populating the tree of life and characterizing biodiversity1-4. Sparse taxon sampling has previously been proposed to confound phylogenetic inference5, and captures only a fraction of the genomic diversity. Here we report a substantial step towards the dense representation of avian phylogenetic and molecular diversity, by analysing 363 genomes from 92.4% of bird families-including 267 newly sequenced genomes produced for phase II of the Bird 10,000 Genomes (B10K) Project. We use this comparative genome dataset in combination with a pipeline that leverages a reference-free whole-genome alignment to identify orthologous regions in greater numbers than has previously been possible and to recognize genomic novelties in particular bird lineages. The densely sampled alignment provides a single-base-pair map of selection, has more than doubled the fraction of bases that are confidently predicted to be under conservation and reveals extensive patterns of weak selection in predominantly non-coding DNA. Our results demonstrate that increasing the diversity of genomes used in comparative studies can reveal more shared and lineage-specific variation, and improve the investigation of genomic characteristics. We anticipate that this genomic resource will offer new perspectives on evolutionary processes in cross-species comparative analyses and assist in efforts to conserve species. | - |
dc.format.extent | 6 p. | - |
dc.format.mimetype | application/pdf | - |
dc.language.iso | eng | - |
dc.publisher | Nature Publishing Group | - |
dc.relation.isformatof | Reproducció del document publicat a: https://doi.org/10.1038/s41586-020-2873-9 | - |
dc.relation.ispartof | Nature, 2020, vol. 587, num. 7833, p. 252-257 | - |
dc.relation.uri | https://doi.org/10.1038/s41586-020-2873-9 | - |
dc.rights | (c) cc-by, Feng et. al., 2020 | - |
dc.rights.uri | http://creativecommons.org/licenses/by/3.0/es/ | * |
dc.source | Articles publicats en revistes (Genètica, Microbiologia i Estadística) | - |
dc.subject.classification | Genomes | - |
dc.subject.classification | Biodiversitat | - |
dc.subject.classification | Cladística | - |
dc.subject.other | Genomes | - |
dc.subject.other | Biodiversity | - |
dc.subject.other | Cladistic analysis | - |
dc.title | Dense sampling of bird diversity increases power of comparative genomics | - |
dc.type | info:eu-repo/semantics/article | - |
dc.type | info:eu-repo/semantics/acceptedVersion | - |
dc.type | info:eu-repo/semantics/publishedVersion | - |
dc.identifier.idgrec | 706495 | - |
dc.date.updated | 2021-03-01T13:56:08Z | - |
dc.relation.projectID | info:eu-repo/grantAgreement/EC/H2020/810002/EU//QuantumBirds | - |
dc.relation.projectID | info:eu-repo/grantAgreement/EC/H2020/681396/EU//Extinction Genomics | - |
dc.relation.projectID | info:eu-repo/grantAgreement/EC/H2020/677696/EU//UNICODE | - |
dc.rights.accessRights | info:eu-repo/semantics/openAccess | - |
dc.identifier.pmid | 33177665 | - |
Appears in Collections: | Articles publicats en revistes (Biologia Evolutiva, Ecologia i Ciències Ambientals) Articles publicats en revistes (Institut de Recerca de la Biodiversitat (IRBio)) Publicacions de projectes de recerca finançats per la UE Articles publicats en revistes (Genètica, Microbiologia i Estadística) |
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706495.pdf | 11.38 MB | Adobe PDF | View/Open |
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