Please use this identifier to cite or link to this item:
https://hdl.handle.net/2445/183016
Title: | HTSDSF Explorer, A Novel Tool to Analyze High-throughput DSF Screenings: HTSDSF Explorer, a tool for DSF screenings |
Author: | Martin Malpartida, Pau Hausvik, Emil Underhaug, Jarl Torner, Carles Martinez, Aurora Macias, Maria Jesus |
Keywords: | automatic Tm
automatic KD analysis Differential scanning fluorimetry high-throughput compound screening thermal shift assay Arquitectura client-servidor (Informàtica) Medicaments Client/server computing Drugs |
Issue Date: | 19-Nov-2021 |
Publisher: | Academic Press |
Abstract: | The identification of new drugs for novel therapeutic targets requires the screening of libraries containing tens of thousands of compounds. While experimental screenings are assisted by high-throughput technologies, in target-based biophysical assays, such as differential scanning fluorimetry (DSF), the analysis steps must be calculated manually, often combining several software packages. To simplify the determination of the melting temperature (Tm) of the target and the change induced by ligand binding (?Tm), we developed the HTSDSF explorer, a versatile, all-in-one, user-friendly application suite. Implemented as a server-client application, in the primary screenings, HTSDSF explorer pre-analyzes and displays the Tm and ?Tm results interactively, thereby allowing the user to study hundreds of conditions and select the primary hits in minutes. This application also allows the determination of preliminary binding constants (KD) through a series of subsequent dose–response assays on the primary hits, thereby facilitating the ranking of validated hits and the advance of drug discovery efforts. © 2021 Elsevier Ltd |
Note: | Versió postprint del document publicat a: https://doi.org/10.1016/j.jmb.2021.167372 |
It is part of: | Journal Of Molecular Biology, 2021 |
URI: | https://hdl.handle.net/2445/183016 |
Related resource: | https://doi.org/10.1016/j.jmb.2021.167372 |
ISSN: | 0022-2836 |
Appears in Collections: | Articles publicats en revistes (Institut de Recerca Biomèdica (IRB Barcelona)) |
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File | Description | Size | Format | |
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Martin et al_J Mol Biol_2021.pdf | 1.34 MB | Adobe PDF | View/Open |
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