Browsing by Author Orozco López, Modesto

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Issue DateTitleAuthor(s)
7-May-20204D Genome rewiring during oncogene-induced and replicative senescendeSati, Satish; Bonev, Boyan; Szabo, Quentin; Jost, Daniel; Bensadoun, Paul; Serra, Francois; Loubiere, Vincent; Papadopoulos, Giorgio Lucio; Rivera-Mulia, Juan-Carlos; Frisch, Lauriane; Bouret, Pauline; Castillo, David; Gelpí Buchaca, Josep Lluís; Orozco López, Modesto; Vaillant, Cedric; Pellestor, Franck; Bantignies, Frederic; Marti Renom, Marc A.; Gilbert, David M.; Lemaitre, Jean-Marc; Cavalli, Giacomo
14-Dec-2018A multifunctional toolkit for target-directed cancer therapyTerrazas Martínez, Montserrat; Sánchez, Dani; Battistini, Federica; Villegas, Núria; Brun-Heath, Isabelle; Orozco López, Modesto
22-Apr-2019A synthetic genetic polymer with an uncharged backbone chemistry based on alkyl phosphonate nucleic acidsArangundy-Franklin, Sebastian; Taylor, Alexander I.; Porebski, Benjamin T.; Genna, Vito; Peak-Chew, Sew; Vaisman, Alexandra; Woodgate, Roger; Orozco López, Modesto; Holliger, Philipp
14-Jun-2018Allosterism and signal transfer in DNABalaceanu, Alexandra; Pérez, Alberto; Dans, Pablo D.; Orozco López, Modesto
17-Jan-2019An In-Depth Look at DNA Crystals through the Prism of Molecular Dynamics SimulationsKuzmanic, Antonija; Dans, Pablo D.; Orozco López, Modesto
29-Jul-2005Anàlisi bioinformàtica de les mutacions puntuals patològiquesFerrer Costa, Carles
4-Jan-2016BIGNASim: A NoSQL database structure and analysis portal for nucleic acids simulation dataHospital Gasch, Adam; Andrio, Pau; Cugnasco, Cesare; Codo, Laia; Becerra, Yolanda; Dans, Pablo D.; Battistini, Federica; Torres, Jordi; Goñi Macià, Josep Ramon; Orozco López, Modesto; Gelpí Buchaca, Josep Lluís
6-Aug-2020Bioactive conformational ensemble server and database. A public framework to speed up in silico drug discovery.Zivanovic, Sanja; Bayarri, Genís; Colizzi, Francesco; Moreno, David; Gelpí Buchaca, Josep Lluís; Soliva, Robert; Hospital Gasch, Adam; Orozco López, Modesto
2-May-2022BioExcel Building Blocks Workflows (BioBB-Wfs), an integrated web-based plartform for biomolecular simulations.Bayarri, Genís; Andrio, Pau; Hospital Gasch, Adam; Orozco López, Modesto; Gelpi Buchaca, Josep Lluís
10-Sep-2019BioExcel Building Blocks, a software library for interoperable biomolecular simulation workflows.Andrio, Pau; Hospital Gasch, Adam; Conejero, Javier; Jordá, Luis; Del Pino, Marc; Codo, Laia; Soiland-Reyes, Stian; Goble, Carole; Lezzi, Daniele; Badia, Rosa M.; Orozco López, Modesto; Gelpí Buchaca, Josep Lluís
18-Mar-2016Biological applications of discrete molecular dynamicsSfriso, Pedro
2013BioSuper: A web tool for the superimposition of biomolecules and assemblies with rotational symmetryRueda Borrego, Manuel; Orozco López, Modesto; Totrov, Maxim; Abagyan, Ruben
2015Can a denaturant stabilize DNA? Pyridine reverses DNA denaturation in acidic pHPortella, Guillem; Terrazas Martínez, Montserrat; Villegas, Núria; González, Carlos; Orozco López, Modesto
13-Jul-2007Caracterització bioinformàtica de la contribució de l' "splicing" alternatiu a la variabilitat del proteomaTalavera i Baró, David
27-Sep-2018Challenges and guidelines toward 4D nucleome data and model standardsMartí Renom, Marc A.; Almouzni, Genevieve; Bickmore, Wendy A.; Bystricky, Kerstin; Cavalli, Giacomo; Fraser, Peter; Gasser, Susan M.; Giorgetti, Luca; Heard, Edith; Nicodemi, Mario; Nollmann, Marcelo; Orozco López, Modesto; Pombo, Ana; Torres Padilla, Maria Elena
6-Aug-2016Challenges of docking in large, flexible and promiscuous binding sitesKotev, Martin; Soliva, Robert; Orozco López, Modesto
26-Apr-2017Compaction of Duplex Nucleic Acids upon Native Electrospray Mass Spectrometry.Porrini, Massimiliano; Rosu, Frédéric; Rabin, Clémence; Darré, Leonardo; Gómez, Hansel; Orozco López, Modesto; Gabelica, Valérie
19-Nov-2020Comprehensive study of 3D chromatin structureLema Amado, Rafael
25-Jun-2014Computational study of DNA in non-canonical environmentArcella, Annalisa
15-Feb-2016Conformational plasticity of RepB, the replication initiator protein of promiscuous streptococcal plasmid pMV158Boer, Roeland; Ruiz Masó, José Angel; Petoukhov, Maxim; Machón Sobrado, Cristina; Svergun, Dmitri; Orozco López, Modesto; Solar, Gloria Del; Coll, Miquel