Automated measurement of the spontaneous tail coiling of zebrafish embryos as a sensitive behavior endpoint using a workflow in KNIME

dc.contributor.authorOgungbemi, Afolarin O.
dc.contributor.authorTeixidó Condomines, Elisabet
dc.contributor.authorMassei, Riccardo
dc.contributor.authorScholz, Stefan
dc.contributor.authorKüster, Eberhard
dc.date.accessioned2023-01-30T11:29:18Z
dc.date.available2023-01-30T11:29:18Z
dc.date.issued2021-04-19
dc.date.updated2023-01-30T11:29:18Z
dc.description.abstractNeuroactive substances are the largest group of chemicals detected in European surface waters. Mixtures of neuroactive substances occurring at low concentrations can induce adverse neurological effects in humans and organisms in the environment. Therefore, there is a need to develop new screening tools to detect these chemicals. Measurement of behavior or motor effects in rodents and fish are usually performed to assess potential neurotoxicity for risk assessment. However, due to pain and stress inflicted on these animals, the scientific community is advocating for new alternative methods based on the 3R principle (reduce, replace and refine). As a result, the behavior measurement of early stages of zebrafish embryos such as locomotor response, photomotor response and spontaneous tail coiling are considered as a valid alternative to adult animal testing. In this study, we developed a workflow to investigate the spontaneous tail coiling (STC) of zebrafish embryos and to accurately measure the STC effect in the KNIME software. We validated the STC protocol with 3 substances (abamectin, chlorpyrifos-oxon and pyracostrobin) which have different mechanisms of action. The KNIME workflow combined with easy and cost-effective method of video acquisition makes this STC protocol a valuable method for neurotoxicity testing.
dc.format.mimetypeapplication/pdf
dc.identifier.idgrec727310
dc.identifier.issn2215-0161
dc.identifier.urihttps://hdl.handle.net/2445/192795
dc.language.isoeng
dc.publisherElsevier
dc.relation.isformatofReproducció del document publicat a: https://doi.org/10.1016/j.mex.2021.101330
dc.relation.ispartofMethodsX, 2021, vol. 8
dc.relation.urihttps://doi.org/10.1016/j.mex.2021.101330
dc.rightscc-by (c) Ogungbemi, Afolarin O. et al., 2021
dc.rights.accessRightsinfo:eu-repo/semantics/openAccess
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.sourceArticles publicats en revistes (Farmacologia, Toxicologia i Química Terapèutica)
dc.subject.classificationNeurotoxicologia
dc.subject.classificationHiperactivitat
dc.subject.classificationInhibidors enzimàtics
dc.subject.otherNeurotoxicology
dc.subject.otherHyperactivity
dc.subject.otherEnzyme inhibitors
dc.titleAutomated measurement of the spontaneous tail coiling of zebrafish embryos as a sensitive behavior endpoint using a workflow in KNIME
dc.typeinfo:eu-repo/semantics/article
dc.typeinfo:eu-repo/semantics/publishedVersion

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