HTSDSF Explorer, A Novel Tool to Analyze High-throughput DSF Screenings: HTSDSF Explorer, a tool for DSF screenings

dc.contributor.authorMartin Malpartida, Pau
dc.contributor.authorHausvik, Emil
dc.contributor.authorUnderhaug, Jarl
dc.contributor.authorTorner, Carles
dc.contributor.authorMartinez, Aurora
dc.contributor.authorMacias, Maria Jesus
dc.date.accessioned2022-02-08T17:44:05Z
dc.date.available2022-11-19T06:10:26Z
dc.date.issued2021-11-19
dc.date.updated2022-02-08T13:49:54Z
dc.description.abstractThe identification of new drugs for novel therapeutic targets requires the screening of libraries containing tens of thousands of compounds. While experimental screenings are assisted by high-throughput technologies, in target-based biophysical assays, such as differential scanning fluorimetry (DSF), the analysis steps must be calculated manually, often combining several software packages. To simplify the determination of the melting temperature (Tm) of the target and the change induced by ligand binding (?Tm), we developed the HTSDSF explorer, a versatile, all-in-one, user-friendly application suite. Implemented as a server-client application, in the primary screenings, HTSDSF explorer pre-analyzes and displays the Tm and ?Tm results interactively, thereby allowing the user to study hundreds of conditions and select the primary hits in minutes. This application also allows the determination of preliminary binding constants (KD) through a series of subsequent dose–response assays on the primary hits, thereby facilitating the ranking of validated hits and the advance of drug discovery efforts. © 2021 Elsevier Ltdca
dc.format.extent10 p.
dc.format.mimetypeapplication/pdf
dc.identifier.idimarina6543073
dc.identifier.issn0022-2836
dc.identifier.urihttps://hdl.handle.net/2445/183016
dc.language.isoengca
dc.publisherAcademic Pressca
dc.relation.isformatofVersió postprint del document publicat a: https://doi.org/10.1016/j.jmb.2021.167372
dc.relation.ispartofJournal Of Molecular Biology, 2021
dc.relation.urihttps://doi.org/10.1016/j.jmb.2021.167372
dc.rightscc by-nc-nd (c) Elsevier, 2021
dc.rights.accessRightsinfo:eu-repo/semantics/openAccess
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/3.0/es/*
dc.sourceArticles publicats en revistes (Institut de Recerca Biomèdica (IRB Barcelona))
dc.subjectautomatic Tm automatic KD analysisca
dc.subjectDifferential scanning fluorimetry high-throughput compound screening thermal shift assayca
dc.subject.classificationArquitectura client-servidor (Informàtica)
dc.subject.classificationMedicaments
dc.subject.otherClient/server computing
dc.subject.otherDrugs
dc.titleHTSDSF Explorer, A Novel Tool to Analyze High-throughput DSF Screenings: HTSDSF Explorer, a tool for DSF screeningsca
dc.typeinfo:eu-repo/semantics/articleca
dc.typeinfo:eu-repo/semantics/acceptedVersion

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