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2020-05-15

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(c) cc-by-nc Kapun, Martin et al., 2020
Si us plau utilitzeu sempre aquest identificador per citar o enllaçar aquest document: https://hdl.handle.net/2445/174499

Genomic analysis of European Drosophila melanogaster populations reveals longitudinal structure, continent-wide selection, and previously unknown DNA viruses

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Recurs relacionat

https://doi.org/10.1093/molbev/msaa120

Resum

Genetic variation is the fuel of evolution, with standing genetic variation especially important for short-term evolution and local adaptation. To date, studies of spatiotemporal patterns of genetic variation in natural populations have been challenging, as comprehensive sampling is logistically difficult, and sequencing of entire populations costly. Here, we address these issues using a collaborative approach, sequencing 48 pooled population samples from 32 locations, and perform the first continent-wide genomic analysis of genetic variation in European Drosophila melanogaster. Our analyses uncover longitudinal population structure, provide evidence for continent-wide selective sweeps, identify candidate genes for local climate adaptation, and document clines in chromosomal inversion and transposable element frequencies. We also characterize variation among populations in the composition of the fly microbiome, and identify five new DNA viruses in our samples

Matèries

Genètica, Drosòfila melanogaster, ADN

Matèries (anglès)

Genetics, Drosophila melanogaster, DNA

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Articles publicats en revistes (Genètica, Microbiologia i Estadística)
Articles publicats en revistes (Institut de Recerca de la Biodiversitat (IRBio))

Citació

KAPUN, Martin, BARRÓN, Maite g., STAUBACH, Fabian, OBBARD, Darren j., WIBERG, R. axel w., VIEIRA, Jorge, GOUBERT, Clément, ROTA STABELLI, Omar, KANKARE, Maaria, BOGAERTS MÁRQUEZ, María, HAUDRY, Annabelle, WAIDELE, Lena, KOZERETSKA, Iryna, PASYUKOVA, Elena g., LOESCHCKE, Volker, PASCUAL BERNIOLA, Marta, VIEIRA, Cristina p., SERGA, Svitlana, MONTCHAMP MOREAU, Catherine, ABBOTT, Jessica, GIBERT, Patricia, PORCELLI, Damiano, POSNIEN, Nico, SÁNCHEZ-GRACIA, Alejandro, GRATH, Sonja, SUCENA, Élio, BERGLAND, Alan o., GARCÍA GUERREIRO, María pilar, ONDER, Banu sebnem, ARGYRIDOU, Eliza, GUIO, Lain, SCHOU, Mads fristrup, DEPLANCKE, Bart, VIEIRA, Cristina, RITCHIE, Michael g., ZWAAN, Bas j., TAUBER, Eran, ORENGO FERRIZ, Dorcas j., PUERMA RODRÍGUEZ, Eva maría, AGUADÉ PORRES, Montserrat, SCHMIDT, Paul, PARSCH, John, BETANCOURT, Andrea j., FLATT, Thomas, GONZALEZ, Josefa. Genomic analysis of European Drosophila melanogaster populations reveals longitudinal structure, continent-wide selection, and previously unknown DNA viruses. _Molecular Biology and Evolution_. 2020. Vol. 37, núm. 9, pàgs. 2661-2678. [consulta: 23 de gener de 2026]. ISSN: 0737-4038. [Disponible a: https://hdl.handle.net/2445/174499]

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