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Molecular dynamics modelling of the interaction of a synthetic zinc-finger miniprotein with DNA

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dc.contributor.authorRodriguez, Jessica
dc.contributor.authorBattistini, Federica
dc.contributor.authorLearte-Aymamí, Soraya
dc.contributor.authorOrozco López, Modesto
dc.contributor.authorMascareñas, José L.
dc.date.accessioned2026-02-25T13:20:47Z
dc.date.available2026-02-25T13:20:47Z
dc.date.issued2023
dc.date.updated2026-02-25T13:20:54Z
dc.description.abstractWe report the modelling of the DNA complex of an artificial miniprotein composed of two zinc finger modules and an AT-hook linking peptide. The computational study provides for the first time a structural view of these types of complexes, dissecting interactions that are key to modulate their stability. The relevance of these interactions was validated experimentally. These results confirm the potential of this type of computational approach for studying peptide–DNA complexes and suggest that they could be very useful for the rational design of non-natural, DNA binding miniproteins.
dc.format.extent8 p.
dc.format.mimetypeapplication/pdf
dc.identifier.idgrec751065
dc.identifier.urihttps://hdl.handle.net/2445/227420
dc.language.isoeng
dc.publisherRoyal Society of Chemistry
dc.relation.isformatofReproducció del document publicat a: https://doi.org/10.1039/d3cb00053b
dc.relation.ispartofRSC Chemical Biology, 2023, vol. 4, p. 486-493
dc.relation.urihttps://doi.org/10.1039/d3cb00053b
dc.rightscc-by-nc (c) J Rodriguez et al., 2023
dc.rights.accessRightsinfo:eu-repo/semantics/openAccess
dc.rights.urihttp://creativecommons.org/licenses/by-nc/4.0/
dc.sourceArticles publicats en revistes (Bioquímica i Biomedicina Molecular)
dc.subject.classificationADN
dc.subject.classificationBiologia molecular
dc.subject.otherDNA
dc.subject.otherMolecular biology
dc.titleMolecular dynamics modelling of the interaction of a synthetic zinc-finger miniprotein with DNA
dc.typeinfo:eu-repo/semantics/article
dc.typeinfo:eu-repo/semantics/publishedVersion

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