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Si us plau utilitzeu sempre aquest identificador per citar o enllaçar aquest document: https://hdl.handle.net/2445/184139
Looking for a needle in a haystack. SARS-CoV-2 variant characterization in sewage
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SARS-CoV-2 variants are emerging worldwide, and monitoring them is key in providing early warnings. Here, we summarize the different analytical approaches currently used to study the dissemination of SARS-CoV-2 variants in wastewater and discuss their advantages and disadvantages. We also provide preliminary results of two sensitive and cost-effective approaches: variant-specific reverse transcription-nested PCR assays and a nonvariant-specific amplicon deep sequencing strategy that targets three key regions of the viral spike protein. Next-generation sequencing approaches enable the simultaneous detection of signature mutations of different variants of concern in a single assay and may be the best option to explore the real picture at a particular time. Targeted PCR approaches focused on specific signature mutations will need continuous updating but are sensitive and cost-effective.
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ITARTE, Marta, BOFILL MAS, Silvia, MARTÍNEZ-PUCHOL, Sandra, TORRELL, Helena, CERETÓ, Adrià, CARRASCO, Marina (carrasco pérez), FORÉS, Eva, CANELA, Núria, GIRONÈS LLOP, Rosina, RUSIÑOL, Marta. Looking for a needle in a haystack. SARS-CoV-2 variant characterization in sewage. _Current Opinion in Environmental Science & Health_. 2021. Vol. 24, núm. 100308. [consulta: 20 de gener de 2026]. ISSN: 2468-5844. [Disponible a: https://hdl.handle.net/2445/184139]